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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58613729, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.49
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFFWTLAVI VIYCIGHIHG RCERSLDLDN GSINYRPRNI VRFRCNRGYT LQGIVMQTCD  60
   61 RDGRLRGEKP FCASRGCAKP EDPENGHVEN LSLRADVVCH DGYVLVGGRT AYCDGERWST 120
  121 QLGSCRRSNH TRDHSCDFES EDQCGWEAET TFRRPWKRVS TVSDIHSLRT GPRHDHTFKN 180
  181 ESGGHYMRME TQMGAYGSYH LLSPIYPRSL TLKTACCFRF HYFMFGAGVD NLVVSVKPVS 240
  241 MPMATMWNRF RANCSKFEIS GQQGTQWLEH TISIDEMQED FQVIFTATDA RSQFGDIAID 300
  301 DVKLMTGSEC GTNGFSTTTE PTAPTGSNEQ PLVYDMMSCS GRCGTSMSAS NITNNGIVMG 360
  361 CGCNDECLSD ETCCLNYLEE CTKELLTTTE DDISSLPPTV TSISTSTTRK STTTTTTSTT 420
  421 TTSTTTTKRP TTTTTTTKAT TTKRTTTTKK PTTTSTTPKP TTTTSTTPKS TTSTTFTTST 480
  481 TSTRPTTTTT INVFTTKKTT IMIPTSSTEK TTGINTTMKT RKRITWNVDP QDIEGHMDTS 540
  541 GSTPNPALVV LYLLLAIVLV VVLANVVNRW IIPITGSKTS SEKAVRFKKA FDSLRKQRKR 600
  601 NSMDDQPLCD SDNDDVEYFE EMGVDIRHRT DL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle