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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58613677
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFFLALTLI LAYSLDTANG SCEGSLDLEN GRFFTRSNNL VIFQCNRGFV LQGNSIHTCD  60
   61 RDGRLREKKP FCARKGCEKP EDPTNGYVLD NPVKAEIVCL DGFVLYGSRT AFCDGEKWST 120
  121 QLGACRRSNH TMDHSCDFES EDQCGWSAEE TIWLPWKRIS AVTDFHHPRT GPRYDHTFGN 180
  181 TSGGHYMRME TQIEAYGSYH FVSPVYPRSL CLNVACCFRF HYFMFGAGVD RLVVSVKPAS 240
  241 LQIDDMWNSF RSNSSKFEIT GSQGTHWLEH TITIDKMHED FQVVFTATDA RSQFGDIAID 300
  301 DVKLMTGSEC GVDGYSTTTT TESASSAMSS SEEPLVFDMM SCTFRCGSIS PGSPLFSDEG 360
  361 IVMSCGCDDS CILNNNCCPN YFEKCVKELD IGSNVFLNSA NTTTTPRSRN TTTEKVFSIS 420
  421 LEASRSFTTP RTSTNSTTFP RTQISTKKLL NTHETSTETS TIPTRNKKLS QPSIFSSQHI 480
  481 TVTTTTDRSR KDYHEDIAGQ LDMNTNIPHP ALIVMYLLIG VILVIVVANL KQLCKILTKN 540
  541 SSRDNEKVVS FKKAFEGLRK PRRLSQNCNG MDQHLCSAFD EDLDYFEDMD MNIRMVTDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle