YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62205294, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESVGFFTK ACVVLVLLCG LHLIVALIFY LSESPLAKFR NYRHISFISD MVNSQTHGEL  60
   61 GQADNETLDV AVYKRIYNNE TVIIGDVEKP AEVLESCPET SPLLVGQLRV EFSTPVDFNL 120
  121 VRQGNKHLTM GGRYTPTKCV ALQKVAMITP YRNREEHLKY WLYYLHPILK RQLLDYGIYI 180
  181 IEQDGENTPN KTLKSLTICI LGLSLRISVT LMVE

Type	Start	End	Confidence
Cytoplasmic	1	6	0.62
Transmembrane Helix	7	31	0.70
Non-Cytoplasmic	32	214	0.83