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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62089564, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVVGLVSV LLLIIPATTY ATTPTFSVDY HRNCFLKDGE PFRYISGSIH YSRIPRVYWK  60
   61 DRLLKMYMAG LNAIQTYVPW NFHEAVPGQY DFSGDRDLEQ FLQLCQDIGL LVIMRPGPYI 120
  121 CAEWDMGGLP AWLLKKKDIV LRSSDPDYLA AVDKWMGKLL PIIKRYLYQN GGPIITVQVE 180
  181 NEYGSYFACD FNYMRHLSQL FRFYLGEEAV LFTTDGAGLG YLKCGSLQGL YATVDFGPGA 240
  241 NVTAAFEAQR HVEPRGPLVN SEFYPGWLDH WGEKHSVVPT SAVVKTLNEI LEIGANVNLY 300
  301 MFIGGTNFGY WNGANTPYGP QPTSYDYDSP LTEAGDLTEK YFAIREVIKM YKDVPEGILP 360
  361 PSTPKFAYGK VQMKKLKTVS ETLDVLSFSG PVKTLYPPTF IEMNQAFGFV LYQTVLPVNC 420
  421 VKPTPLSSPL NGVHDRAYIS IDGIAAGILE RNKALSINIT GKAGSHVDVL VENMGRINYG 480
  481 KGINDFKGLV FNLTLGADVL VNWTVYSLSV DEAVSKGLLS ASGSSSTSST STPPPALSPP 540
  541 TFYTGSFIIP DGIPDLPQDT YIQFPDWRKG QVWINGFNVG RYWPSRGPQI TLFVPAHLLS 600
  601 TSVQNNITVL ELEASPCSSG SCMVEFTDTP ILNGTVNSQY KRQLFNKQDL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle