YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62203249, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEDPFFVV KGEVQKAVNT AQGLHQRWIE LLQDAGGASK EEVDWTTNEL RNSLRSIEWD  60
   61 LEDLDETISI VEANPKKFNL DAMELAKRKA FITSTRQTVR EMKDHMTSPM AITVPEKKNR 120
  121 QTLMGEGGSR GPIWQPSGEK YTRLDNELQT ANSQFIEEQQ TQQQLIAEKQ DEHLELVSGT 180
  181 IGVLKNMSQR IGQELDEQAV MLDDFSHEMD STQSRLDNVM KKLAKVSHMT SDKRQWCAIG 240
  241 VLLAILFVVI LLFIIL

Type	Start	End	Confidence
Cytoplasmic	1	235	0.87
Transmembrane Helix	236	255	0.97
Non-Cytoplasmic	256	256	0.88