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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNB2_BOVIN
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKVPPGLN RKTSRSTLSL PPEPVDIIRS KTCSRRVKIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ESLLEVCDDY NLNENEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE ELRREAETMR EREGEEFDNT CCPEKRKKLW 180
  181 DLLEKPNSSV AAKILAIVSI LFIVLSTIAL SLNTLPELQE MDEFGQPNDN PQLAHVEAVC 240
  241 IAWFTMEYLL RFLSSPNKWK FFKGPLNVID LLAILPYYVT IFLTESNKSV LQFQNVRRVV 300
  301 QIFRIMRILR ILKLARHSTG LQSLGFTLRR SYNELGLLIL FLAMGIMIFS SLVFFAEKDE 360
  361 DATKFTSIPA SFWWATITMT TVGYGDIYPK TLLGKIVGGL CCIAGVLVIA LPIPIIVNNF 420
  421 SEFYKEQKRQ EKAIKRREAL ERAKRNGSIV SMNLKDAFAR SMELIDVAVE KTGESANTKG 480
  481 STDDNHLSPS RWKWARKALS ETSSNKSYEN KYQEVSQKDS HEQLNNTSSS SPQHLSAQKL 540
  541 EMLYNEITKT QPHSHPNPDG QEQAERPSTY EEEIEMEEVV CPQEQLAVAQ TEGVVDMKST 600
  601 SSIDSFTSCA TDFTETERSP LPPPSASHLQ MKFPPDLAGL EEHQRARAPP FLALIRQKGP 660
  661 TVREATPEYA PIDITVNLDA AGGPQGGPHG PLPTDCASES PKSSLKGSNP LKSRSLKVNF 720
  721 KDSRGGAPPT PPSTARPLPV TAADFPLTAP QLISTILLEE TPSQGDRPLL GAEVHCQGPS 780
  781 KGLTPRFPKQ KLFTFSARER RSFTEIDTGE DDDFLELQGT RRPDKQADSS PNCLTDKPSD 840
  841 GRDPLREEAC VGSSSAQDTS HNCRQGIYHG VAEVKKDNSQ EGCKMENHLF APEIHSNPGD 900
  901 TGYCPTRETS M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle