YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62903398
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KASLADSXEY MCKVISKLGN DGASANITIV ESNEFITGMP ASTETAYVSS ESPIRISVST  60
   61 EGANTSSSTS TSTTGTSHLI RCAEKEKTFC VNGGECFTVK DLSNPSRYLC KCPNEFTGDR 120
  121 CQNYVMASFY KHLGIEFMEA EELYQKRVLT ITGICIALLV VGILCVVAYC KTKKQRQKLH 180
  181 DRLRQSLRSE RSNLVNIANG PHHPNPPPEN VQLVNQYVSK NVISSEHIVE REVETSFSTS 240
  241 HYTSTAHHST TVTQTPSHSW SNGHTESVIS ESNSVIMMSS VENSRHSSPA GGPRGRLHGL 300
  301 GGPRDNSFLR HARETPDSYR DSPHSERHNL IAELRRNKAY RSKCMQIQLS ATHLRPSSIT 360
  361 HLGFIL

Type	Start	End	Confidence
Cytoplasmic	1	147	0.47
Transmembrane Helix	148	170	0.88
Non-Cytoplasmic	171	366	0.53