YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46402892, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLSPSTST TCYLSSSPSA FLPRHSHGFQ NLGSAGTFKF SKKQRRCVRK AGPTEISAKF  60
   61 ELKPPPYPMN ALEPIMSQET FNYHWGKHHR AYVDNLNKQI EGTDLDGKSL EELIVIAYNK 120
  121 GDMLPSFNNA AQAWNHEFFW DSMKPGGGGK PSGDLLKLIE RDFGSFEKFV DEFKTAAATQ 180
  181 FGSGWAWLAY KENRLDVGNA INPLASDEDK KLVVVKTPNA VNPLVWGYYP LLTIDVWEHA 240
  241 YYLDYQNRRP DFISVFIDKL VSWEAVSSRL EQAKAIVAEK EREDERRRTE EEEKSTIRET 300
  301 PHEIFPDNDS D

Type	Start	End	Confidence
Signal Peptide	1	28	0.72
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	311	0.99