YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119709837, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQSDGCLEV KEFEDIPPNT VNMALQIPQY FLLTCGEVVF SVTGLEFSYS QAPSNMKSVL  60
   61 QAGWLLTVAI GNIIVLIVAE AGHFDKQWAE YVLFASLLLV VCIIFAIMAR FYTYINPAEI 120
  121 EAQFDEDEKK KGVGKENPYS SLEPVSQTNM

Type	Start	End	Confidence
Cytoplasmic	1	61	0.59
Transmembrane Helix	62	83	0.90
Non-Cytoplasmic	84	90	0.73
Transmembrane Helix	91	114	0.88
Cytoplasmic	115	150	0.85