YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59862066, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENEGPNLQ DEHLQGSWVE LHFSNNGNFP TTQLMGQDQG PASISIHNGD MEKILLDAQH  60
   61 ESGRSSSRES SHCDSPPRSQ TPSIQRCSES DTSGSKEKSS SQSEEDYIER RKELENLLKK 120
  121 NSDWIWDWSS RPENIPPKEF LFKHPKRSSA LSMRNTSVMK KGGIFSAEFL KVFLPSLLLS 180
  181 HLLAIGLGVY IGRRLTTSTG TF

Type	Start	End	Confidence
Cytoplasmic	1	168	0.77
Transmembrane Helix	169	192	0.81
Non-Cytoplasmic	193	202	0.81