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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAN1_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGRESLVR LIGRRRRSPL PAALALAVPP SRSLQDDAAD AEREAAAGGS SSGGGDAAGA  60
   61 AGWVACPVCG ESIRGTDYCV NTHLDICLTR GTKRKLTQST LLDFSFSRKA TDDYALNNLN 120
  121 TSDEAEHMEP TDGNVSSDGA FFSLNNDKVN SKGSANASSP GCLHGSPDIS ETCDTCLPPN 180
  181 VLLPYTENTA NNGVVKKCLS HMPSTDATSS TIGLLSVTDS SNSVVVDTVI VGRRFHENIE 240
  241 LQEGASITLL RDPQNAKDPD AIKVLYAGYE CEQMLGYLPR ELAKVLAPLL DRHYIECEGC 300
  301 VVGVPEQQLD HVPIQLKCQK YTDENETYDD LKHPQFLWEN FICAVGNGNL LQPSSTRYQT 360
  361 NFSSMITDVM ANHSHLFSDK EKSFLDSFQL LPDDGQRLFV RIYTRKGPWF RMSSISYREI 420
  421 SDLGQAAMEL KLAGYIDMIS CMDDLSNYDL KEVIDVLSVP EMKEILKELQ KNNVSCTRRH 480
  481 ELLSTLLYLY RNGTCTILPK RILKWTGTCI RTSDVADELL WRVQRLFFLN GDQDLSFFLL 540
  541 VDLGLVRFPV YACTISHRVF QEISDLLQYE EAIQVAQVMD QSLDNSNMEM VTRCIELSEN 600
  601 RLSTAPKEEN ATRAEPPPSF FSRFSASSVY SKILTLGVSV YERDRRYTDA IRVLKRLLST 660
  661 VASDRKRGYW ALRLSVDLEH MNRSNESLSI AEAGVIDPWV RAGSKIALQR RVVRLSKPPR 720
  721 RWKVPSYANA VTTNIKEVNI EGRPLNCETG AKNVFYGYDG ELCGVEQLAL QYYADEGGGW 780
  781 RGTHSEGGIW MTIFGLLMWD AIFSDVPDVF QTKFQTAPLD LETDEFYRSR KDLIESQLKK 840
  841 IQDGIAEEIL ISSWELHQGT SCRGVNWDRH SLTDLRAAVV CTGGHRLASL LRHLALDYRS 900
  901 WSSGMPDLLL WRFLDERGGG EAKLVEVKGP RDQLSEQQRA WILVLMDFGF DVEVCKVSPV 960
  961 SKRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle