YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72398025, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKELIILLV LLSASLAIGC AGQKGEAPNT TVTPATPGAA GSEVITVSAA ASLTEAFTNI  60
   61 KYQFEKENPG TNVNLNFASS GNLRRQIEGG APVDVFASAD EAQMNMLANE SLIVNNSRKD 120
  121 FAQNSLVLIV PENSALNITG VKDLADPEVK RLGVGNPDTV PVGNYTRTAL TEAGLWSQLE 180
  181 NKMVFAEDVK QVLTYVERGE VDAGFVYTSD AKTAEPGTVR IITTVPVSIP VKYPIAVISS 240
  241 SEHKEESQKF IDFVTGKEGQ DILKKYGFVS QS

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99