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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72396208, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKQLADFE KSQENYVVNQ SNVRFTQKEA GMIEKKFPGL SNKLIFKKKV PLISFFLAIL  60
   61 ITLPLGVFLC TEVNHLNDAM FGRITILDEP ELLNALRNAQ DRGVIMGVHG WEHENYSTLK 120
  121 PFQAKENVEK GKLVFEKAGL VPRVFISPFD IYGIPTDPSV RQAIESTKVA TRLPSLKTNG 180
  181 THIDEYTWNW RTMESFDDPR FQAASAKIRE DHPQTIVLHA MDWNPYVNQF LIDYLSSTDE 240
  241 KNITVRMDDV EVNTPKDVIT GISQMTKYKS VGRVVLAIIP VGTWKGGNPA IGSLEVNKIM 300
  301 VVYFWFFIIT SLLPLSFFVI WKFLSGWNIR RSKNSCQPQN IQDTGYHGLV SIIVPAYDEE 360
  361 KTIGSCLESI LNQDYNGEME VIVVNDGSTD RTAEIVLKYP VKFIDLKANV GKANALNRAI 420
  421 EDAKGDILIF TDSDSYMSAN AVSSLVECLI TNNDAQIVAG NVFIHNSQGK KRIMKYFQMI 480
  481 EYLIEQEITR YLQSLSGNIL VCPGPLTAVK REVCESVRFS DETIVEDADF TIKALKKSMK 540
  541 IIREPKAKVY TNAPETFRAW YKQRKRWWYG NLQVWRLHRH WAMRNAWMVL NYLGYIIGVC 600
  601 SIILVMFLPY LLLQYDNLLL ISLRGLSYSI LPVLIFIVFT ASLFSKDKKL LPMLIPYVLV 660
  661 YSTIKVVTIS YLYLCYLTGR GLKIQFGPRI IEVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle