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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYM_METBF
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEPSSKPVL VTCGLPYANG KAHIGHLRTY VPADIYARSL RKEGRDVTFV CGSDTHGTPI  60
   61 VVNAEELGIT PKELVEVYHK HFDETFKQLG VYFDAFGTTD DPENHNRTLD IVNRLIEKGY 120
  121 VYPKTIEIAY CPKCNRFLPD RYVEGSCPHC GEIARGDECD QGCGKHLEPG ELLNPVCTIC 180
  181 GGPAEYRQQE HFFFKLSEFS DYLMDYLSND LGGTINARNY ALGWVKQGLT DWCITRNLEW 240
  241 GVKFPGHDDL VVYVWVDAPI GYIAFTEEWA AKAGDSWEKF WKNDGEIVHF IGGDITYHHC 300
  301 IFWPAMLKGA DYSVPTAVVA SGMVKIEDKK FSKSRGNVVW VGEDYLSHGF HPDLLRYYLA 360
  361 SYTSHTKELN FSWRVLQEKI NTELVSVLGN FLYRTMLFAF KNYGEVPSGE LEPEVREEIE 420
  421 KALKEVKAAM AEYEFKKAVD SAMSLASFGN TYFQSHEPWN LIKQDKAACG QVLYNCLHLA 480
  481 KALCLIFEPV TPGSMETAWK ELGQEGDLHT TLYADALVPL KAGTKLAKPK ILFTKLEDDR 540
  541 IEEMEEIANQ RVKAADAKKA AGKGNGKEPT KAEGMGPAEE AKPAEKAGGA AKPREEEKET 600
  601 LPMIEYEDFA KLDIRVGKVL LAEPVKKSKK LIRIEVDIGE EKTRQLVAGL SSYYAPEELV 660
  661 GKSVIVLANL KPAKLCGVKS NGMMLAADDG GEIVSALMPD KEIKPGSRIR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle