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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62663000, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.45
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMARSRRDS VWKYCWGLLM VLCRTAISRS IVLEPIYWNS SNSKFLPGQG LVLYPQIGDK  60
   61 LDIICPKVDS KTVGQYEYYK VYMVDKEQAD RCTIKKENTP LLNCARPDQD VKFTIKFQEF 120
  121 SPNLWGLEFQ KNKDYYIIST SNGSLEGLDN QEGGVCQTRA MKILMKVGQD ASSAGSTRNN 180
  181 DPTRRPELEA GTNGRSSTTS PFVKPNPGSS TDGNSAGHSG NNLLGSEVAL FAGIASGCII 240
  241 FIVIIITLVV LLLKYRRRHR KHSPQHTTTL SLSTLATPKR GGNNNGSEPS DVIIPLRTAD 300
  301 SVFCPHYEKV SGDYGHPVYI VQEMPPQSPA NIYYKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle