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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MASP1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLSFRRLL LYHVLCLTLT EVSAHTVELN EMFGQIQSPG YPDSYPSDSE VTWNITVPEG  60
   61 FRVQLYFMHF NLESSYLCEY DYVKVETEDQ VLATFCGRET TDTEQTPGQE VVLSPGSFMS 120
  121 VTFRSDFSNE ERFTGFDAHY MAVDVDECKE REDEELSCDH YCHNYIGGYY CSCRFGYILH 180
  181 TDNRTCRVEC SGNLFTQRTG TITSPDYPNP YPKSSECSYT IDLEEGFMVT LQFEDIFDIE 240
  241 DHPEVPCPYD YIKIKAGSKV WGPFCGEKSP EPISTQSHSI QILFRSDNSG ENRGWRLSYR 300
  301 AAGNECPKLQ PPVYGKIEPS QAVYSFKDQV LISCDTGYKV LKDNEVMDTF QIECLKDGAW 360
  361 SNKIPTCKIV DCGVPAVLKH GLVTFSTRNN LTTYKSEIRY SCQQPYYKML HNTTGVYTCS 420
  421 AHGTWTNEVL KRSLPTCLPV CGLPKFSRKH ISRIFNGRPA QKGTTPWIAM LSQLNGQPFC 480
  481 GGSLLGSNWV LTAAHCLHHP LDPEEPILHN SHLLSPSDFK IIMGKHWRRR SDEDEQHLHV 540
  541 KHIMLHPLYN PSTFENDLGL VELSESPRLN DFVMPVCLPE HPSTEGTMVI VSGWGKQFLQ 600
  601 RLPENLMEIE IPIVNYHTCQ EAYTPLGKKV TQDMICAGEK EGGKDACAGD SGGPMVTKDA 660
  661 ERDQWYLVGV VSWGEDCGKK DRYGVYSYIY PNKDWIQRVT GVRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle