YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119569131, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTQDSEVVP VPAWPFSLVV FSCGGCWSVT AKMLRNLLAL RQIGQRTIST ASRRHFKNKV  60
   61 PEKQKLFQED DEIPLYLKGG VADALLYRAT MILTVGGTAY AIYELAVASF PKKQE

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.78
Transmembrane Helix	12	31	0.87
Cytoplasmic	32	84	0.80
Transmembrane Helix	85	103	0.58
Non-Cytoplasmic	104	115	0.47