YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149053617, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKVFGLIG KFGLALAVAG GVVNSTLYNV DAGHRAVIFD RFQGVQDIVV GEGTHFLIPW  60
   61 VQKPVIFDCR SQPRNVPVVT GSKDLQNVNI TLRILFRPVT SQLPRIYTSI GLDYAERVLP 120
  121 SITSEILKSV VARFNAEELI TQRELVSKQV SDDLTERAAT FGLILDDVSL THLTFGKEFT 180
  181 EAVEAKQVAQ QEAETARFVV EKAEHQKAAA IISAEGDAKA AELIANSLAT AGDGLIELRK 240
  241 LEAAEDIAYQ LSSSQNITYL PVGPSSVGPS VRQSMFLRLP Q

Type	Start	End	Confidence
Signal Peptide	1	25	0.89
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	281	0.98