YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109479355, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTKALLISP VTIRSCTRGL IRPVSASLLS RPEAPSKTSF CSSLHLQVAR QEFQTSFISD  60
   61 TAAKFIDAGA ATVGVAGSGA AIGTVFGNLI IGYARNLSLK QQLSSYPILG FALSEVMRLF 120
  121 CLMVTFLILF TM

Type	Start	End	Confidence
Cytoplasmic	1	67	0.70
Transmembrane Helix	68	92	0.82
Non-Cytoplasmic	93	107	0.63
Transmembrane Helix	108	130	0.92
Cytoplasmic	131	132	0.60