YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109472239, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVSLSALA VRLLRPTHGC HSRLQSFHLA AVRNEAVVIS GRKLAQQIKQ EVRQEVEEWV  60
   61 ASGNKRPHLS VILVGDNPAS HSYVLNKTRA AAEVGINSET IVKPASVSEE ELLNSIRTLN 120
  121 DDENVDGLLV QLPLPEHIDE RKICNAVSPD KDVDGFHVIN VGRMCLDQYS MLPATPWGVW 180
  181 EILKRTGIPT LGKNVVVAGR SKNVGMPIAM LLHTDGAHER PGGDATVTIS HRHTPKEQLK 240
  241 KHTILADIVI SAAGIPNLIT ADMIKEGATV IDVGINRVQD PVTAKPKLVG DVDFEGVKKK 300
  301 AGYITPVPGG VGPMTVAMLM KNTIIAAKKV LRPEELEVLK STQRGVATN

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	349	0.99