YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HRSL3_RAT
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIPEPKPGD LIEIFRPMYS HWAIYVGDGY VIHLAPPSEI PGAGAASIMS ALTDKAIVKK  60
   61 ELLRDVAGKD KYQVNNKHDK EYTPLPLNKI IQRAEELVGQ EVLYRLTSEN CEHFVNELRY 120
  121 GVPRSDQVRD AVKVATVTGV GLAALGLIGV MLSRNKKQKQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	130	0.66
Transmembrane Helix	131	153	0.76
Cytoplasmic	154	160	0.52