YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOMT_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAIALAFL PLVVTLLVRY RHHFRLLVRT VLLRSFRDCL SGLRIEERAF SYVITHALPG  60
   61 DPGHILTTLD HWSSCCEYLS HMGPIKGQIL MRLVEEKAPA CVLELGTHCG YSTLLIARAL 120
  121 PPGSRLLTVE RDSRTAAVAE KVIRLAGFDE QMVELIAGSS EEVIPRLRAQ HQLNRADLVL 180
  181 LAHRPRYYLR DLQLLEAHAL LPHGATVLAD HVLFPGAPRF LQYTKSCGRY RCRLHHTSLP 240
  241 DFPAIKDGIA QLTYTGPG

Type	Start	End	Confidence
Signal Peptide	1	17	0.90
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	258	0.96