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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57233501
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIGLAVGGA FLSSALNVLF DRLAPNGDLL NMFRKHKDHV RLLKKLKMTL RGLQIVLSDA  60
   61 ENKQASNPSV RDWLNELRDA VDSAENLIEE VNYQVLRLKV EGQHQNLAET GNQQVSDLNL 120
  121 CLSDEFFLNI KDKLEDTIET LKDLQEQIGL LGLKEYFGST KQETRKPSTS VDDESDIFGR 180
  181 QREIEDLIDR LLSEDASGKK LTVVPIVGMG GLGKTTLAKA VYNNERVKNH FGLKAWCCVS 240
  241 EPYDALRITK GLLQEIGKFD SNDVYNNLNQ LQVKLKESLK GKKFLIVLDD VWNDNYNEWD 300
  301 DLRNIFVQGD IGCKIIVTTR KESVALMMGN EQISMNNLPT EASWSLFKTH AFENMDPMGH 360
  361 SELEEVGKQI SAKCKGLPLA LKTLAGMLRS KSDVEEWTRI LRSEIWELPH NDILPALMLS 420
  421 YNDLPAHLKR CFSYCAIFPK DYPFRKEQAI HLWIANGLVP QGDEIIEDSG NQYFLELRSR 480
  481 SLFQRVPNPS ELNIENLFLM HDLVNDLAQV ASSKLCIRLE ESQGYHLLEK GRHLSYSMGY 540
  541 GGEFEKLTPL YKLEQLRTLL PTCNYFMPPN YPLCKRVLHN ILPRLRSLRA LSLSHYWIKD 600
  601 LPDDLFIKLK LLRFLDISHT EIKRLPDFIC GLYNLETLLL SSCGFLEELP LQMEKLINLR 660
  661 HLDISNTSRL KMPLHLSKLK SLQVLVGARF LVGDRGGSRM EDLGEVHNLY GSVSVLELQN 720
  721 VVDSREAVKA KMREKNHVDR LSLEWSGSSS ADNSQTERDI LDELRPHKNI KELQIIGYRG 780
  781 TKFPNWLADP LFLKLVKLSL RNCKNCYSLP ALGELPCLKF LCIRGMHGIT EVTEEFYGSW 840
  841 SSKKPFNCLE KLEFKDMPEW KQWHIPGNGE FPILEDLSIR NCPELSLETV PIQLSSLKSL 900
  901 EVIGSPMVGV VFDDAQLEGM KQIEELRISV NSLTSFPFSI LPTTLKTIEI TDCQKCEMSM 960
  961 FLEELTLNVY NCHNLTRFLI PTATESLFIL YCENVEILLV ACGGTQITSL SIDGCLKLKG1020
 1021 LPERMQELFP SLNTLHLSNC PEIESFPEGG LPFNLQQLII YNCKKLVNGR KEWHLQRLTE1080
 1081 LIIYHDGSDE EIVGGQNWEL PSSIQTLRIW NLETLSSQHL KRLISLQNLS IKGNVPQIQS1140
 1141 MLEQGQFSHL TSLQSLQISS LQSLPESALP SSLSQLTISH CPNLQSLPEF ALPSSLSQLT1200
 1201 INNCPNLQSL SESTLPSSLS QLEISHCPKL QSLPELALPS SLSQLTISHC PKLQSLPESA1260
 1261 LPSSLSQLAI SLCPNLQSLP LKGMPSSLSE LSIDECPLLK PLLEFDKGEY WPNIAQFPTI1320
 1321 KIDGECM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle