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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57233499
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIGLAVGGA FLSSALNVLF DRLAPHGDLL SMFRKHKDHV QLLKKLEDIL LGLQIVLSDA  60
   61 ENKQASNRHV SQWFNKLQNA VDGAENLIEQ VNYEALRLKV EGQHQNLAET SNQQVSDLNL 120
  121 CFSDDFFRNI KDKLEETIET LEVLEKQIGR LGLKEHFGST KQETRTPSTS LVDDSDIFGR 180
  181 QNDIEDLIDR LLSEDASGKK RTVVPIVGMG GLGKTTLAKA VYNDERVQKH FGLKAWFCVS 240
  241 EAFDAFRITK GLLQEIGSFD LKADDNLNQL QVKLKERLKG KKFLIVLDDV WNDNYNKWDE 300
  301 LRNVFVQGDI ESKIIVTTRK ESVALMMGNE QISMDNLSTE ASWSLFKTHA FENMGPMGHP 360
  361 ELEEVGKQIA AKCKGLPLAL KTLAGMLRSK SEVEEWKRIL RSEIWELPHN DILPALMLSY 420
  421 NDLPAHLKRC FSFCAIFPKD YPFRKEQVIH LWIANGLIPQ EDEIIEDSGN QYFLELRSRS 480
  481 LFERVPNPSE GNTENLFLMH DLVNDLAQVA SSKLCIRLEE SQGYHLLEKG RHLSYSMGED 540
  541 GEFEKLTPLY KLERLRTLLP ICIDLTDCYH PLSKRVQLNI LPRLRSLRVL SLSHYRIKDL 600
  601 PDDLFIKLKL LRFLDISHTE IKRFPDSICA LYNLETLLLS SCADLEELPL QMEKLINLRH 660
  661 LDISNTCLLK MPLHLSKLKS LQVLVGAKFL VGGLRMEDLG EVHNLYGSLS VVELQNVVDS 720
  721 REAVKAKMRE KNHVDKLSLE WSESSSADNS QTERDILDEL RPHKNIKELQ IIGYRGTNFP 780
  781 NWLADPLFLK LVQLSLRNCK NCYSLPALGQ LPFLKLLSIG GMPGITEVTE EFYGSWSSKK 840
  841 PFNCLEKLEF KDMPEWKQWD QLGSGEFPIL EKLLIENCPE LGLETVPIQL SSLKSFEVIG 900
  901 SPMVGVVFYD AQLEGMKQIE ELRISDCNSL TSFPFSILPT TLKRIEISDC QKLKLEQPVG 960
  961 EMSMFLEELT LENCDCIDDI SPELLPRART LFVEDCHNLT RFLIPTATET LLIGNCKNVE1020
 1021 KLSVACGGPQ MTSLSIDGSL KLKWLPERMQ ELLPSLKYLQ LSNCPEIESF PEGGLPFNLQ1080
 1081 QLQICNCEKL VNGRKEWRLQ RLLCLTDLFI DHDGSDEEIV GGENWELPSS TQTLGISNLK1140
 1141 TLSSQHLKRL ISLQNLYIEG NVPQIQSMLE QGQFSHLTSL QSLQIENFPN LQSLPESALP1200
 1201 SSLSQLRISL CPNLQSLPLK GMPSSLSKLY IRDCPLLKPL LEFDKGEYWP NIAPFPTIKI1260
 1261 NGECM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle