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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182890020, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAVLFSLW GGVVTPQIGQ AFQKFEETTG ISKGFIKNVE TKLGSDNALH RAEKGKTTLA  60
   61 QMIPEFDAEC QKVAADQGLS LPAQFSTQKL FDDMGKVEFN MTFLDAAAVL RRNGIATGIL 120
  121 ANIWVDDTAQ RGSIARVLSV LESRFDLVLR SCHAGVRIPE PDFFKHALEK LAVKPQEALW 180
  181 LDVDEESVKA AEGLGIMAVQ VKDVTEALTE IQKLTGIEVT SDLQPPSCDP EKVSHGYVNI 240
  241 KPGVKIHYVE MGDGPPVLLC HGFPESWFSW RYQIPALADA GFRVLAPDMK GYGGSTAPPD 300
  301 IEEYSQEQIM LDLVTFLDKM AIAQVTLVGH DWGGVLVWNM AQFHPERVRA VASLNTPLFP 360
  361 VDPNTNPMEK LMAIPIFDYQ IYFQKPGVAE AELEKNLKRT FKLMFISSSD TGGFPKLSPA 420
  421 GVCQRGGLFV GSPDDPPRSS MLSVSALQFY TEQYSKSGFR GPLNWYRNYE RNWRWMVSRP 480
  481 RAKILMPALM VTAGKDPVLL PAFATGMENL IPNLSRGHIE ECGHWTQMER PAELNKILIS 540
  541 WLKETHQKAS ISVHPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle