YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58261016, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRRQHTYNS PPLSLHPPSE PPAMSTVAEL CPVYAPFFGA MGCTSAIVFT CIGAAYGTAK  60
   61 SGVGISAMAV LRPDLMMKCA IPVVMAGIIG IYGLVVSVLI SGNLASPMPL YTGFIQLGAG 120
  121 LSVGLAGLAA GFAIGIVGDA GVRGTAQQPR LFVGMILILI FAEVLGLYGL IVALILNTNS 180
  181 AVDYTCSIAA

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.85
Transmembrane Helix	34	59	0.83
Cytoplasmic	60	78	0.84
Transmembrane Helix	79	100	0.93
Non-Cytoplasmic	101	116	0.75
Transmembrane Helix	117	138	0.91
Cytoplasmic	139	150	0.83
Transmembrane Helix	151	175	0.89
Non-Cytoplasmic	176	190	0.93