YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58258811, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDMWKYTSS NLISACQTST TAFAGSQTIT FVITFLLPFS STYIRRLSSM SNLEKSLFQL  60
   61 KFTAKSLQRQ AKKATKDEAA EKNKLKQALA KGNTDGARIY AQNAIRKKNE GLNLLRLSSR 120
  121 IDAVASRVET AVTMRSVTNS MGSVVKGMDK AMESMNLERI SLVMDKFESQ FADMDVQTSY 180
  181 MESTMSDTTA MATPQDQVDS LMLQVADEAG LEIQHGLGEA KVPAKEPTLG EASKEEDSNL 240
  241 AERLRALRPA T

Type	Start	End	Confidence
Cytoplasmic	1	19	0.61
Transmembrane Helix	20	39	0.75
Non-Cytoplasmic	40	251	0.88