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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66767095, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLSGSRRS CLAVQLSLCL IPSLAWAQQP EPAPSTRTLD SVQVTGTRIK TAELQGQVPI  60
   61 QTLNRADIER TGLTSIGEVL QELTASGSAL NAKFNSSGNF GFPPDDSGVG AGSAQVDLRH 120
  121 LGSKRVLVLV DGIRWVNESS ASGVGSSTDL NTIPLAIVER IEVLEDGASS LYGSDAIAGV 180
  181 VNIITRRTFD GAQVTLNYGQ YGKGDGTNQG MDLAWGTSGE DFSLFLGASY VKQDPIYARD 240
  241 RAQARFPIPG TGLTFASSAT PDGRFQFVDP NTGVRQNLTP NAGVGTPQYD GSGGCTRSDD 300
  301 YHCFGTADRY NFAEQNLLLT PSERKGVFAQ FRYYFNDDVQ WYVKALGNRR ESTNQAAPEP 360
  361 IFLGPDAGTG NPLADNIVIS ALNPFNPFGF DLNSATNLIQ IGRRPVEGGP RRYEQQVDTQ 420
  421 YFGTGLVGTF EGASRTWFWD VNGMYSKNKA EQTNYGSYNL FNINLGLGDP AACAAVAGCV 480
  481 PLDIFSGAGS ITPEMLRWIQ PVVRDRSQNE LSLFTANLSS ELFQLPGGAV SFATGYEYRK 540
  541 YEGSYQPDPL TVAGRYNGVP SLPTSGSYDV NEAYLELNIP IFANSTLGDK LDLNIAGRYS 600
  601 DYSTFGGEFT PKYGLRWQVS DEFVLRTSYA EGFRAPTIGE LFGSAARADL QLSDPCSIGL 660
  661 GGTAPRGSAA NCATLGVPVN YQQANQQISV TTGGNEQLEP ERSRSFSAGF VFSPGFGSNA 720
  721 SWSDRLDLEV TFYRHHVDGA IQAINAQTQL DLCVDTLDAL YCDGIGRAST GGINAFNNRL 780
  781 TNLGSIKTDG WDVDLFWTLP ESALGRFKLS WQNTFVGRYE ALGAAGQRQP QGPGIEVVDS 840
  841 AIPEWTSNAV LDWSLGNWTA SWTARHISKL TEQCGDAVEF AVCSTPAEGT NQLDAITYHD 900
  901 AQVGYRFDWL KGLQLTAGLN NVFDKDPPIC LSCSLNGYDA STYDIPGGRS WYVRADLKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle