YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68057975, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLARLKYGKT NAVLFTTYIG SSMSNLQAII EAAFEKRAEI TPKTVDAETH AAIEEVIEGL  60
   61 DSGKYRVAEK IAGEWVTHQW LKKAVLLSFR INDNQIIDGA ETKYYDKVAL KFADYTEERF 120
  121 TEEGFRVVPS ATVRKGAYIS KNCVLMPSYV NIGAYVGEGT MVDTWATVGS CAQIGKNVHL 180
  181 SGGVGIGGVL EPLQANPTII GDNCFIGARS EVVEGVIVED GCVISMGVFI GQSTKIYDRE 240
  241 TGEIHYGRVP AGSVVVSGSL PSKCGKYSLY CAVIVKKVDA KTLGKVGINE LLRSIEE

Type	Start	End	Confidence
Signal Peptide	1	28	0.56
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	297	0.99