YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LPXK_HAEI8
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFWYSNSKL IWLLSPFSLL FWLISQLRHA LFCLGIKSSY RAPKPVIIVG NLSVGGNGKT  60
   61 PVVVWLVEEL KKRGLRVGVI SRGYGSKSKT YPLFVTENTR PIEGGDEPVL IAKRTNAPVV 120
  121 ISPNRQQAIE LLLSQAECDI IVSDDGLQHY KLQRDLEIVV MDAERALGNG FVLPAGPLRE 180
  181 LPSRLKSVDF VITNGGKNQY SDAVMYLVPH FAINLKTNEK RQLKEFQSGV AIAGIGNPQR 240
  241 FFTMLEKLGI QLERTQAFQD HQHFEASQLE KLAENQPLFM TEKDAVKCQS FANDNWWYVP 300
  301 VDAEIIEAEK QCENLPHFWD KIDKLVAQYR NG

Type	Start	End	Confidence
Signal Peptide	1	30	0.93
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	332	0.98