YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78195005, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRIVILML LAFTSLSLSG CLVAESTYLK KAEEADTLGR EAATLQEMHQ KLSAENGALK  60
   61 AQLAKVREEA AGLAKEKEKL GADNKELEQV LRAKTDTLSQ SVADLRQKVT DLETENTRLK 120
  121 AEIAETRKAR EEKVREVSKT YEDLLDRMKG EIAQGQVTIS ELKGKLTVNM VDAILFDSGK 180
  181 AEVKQGGMEV LAKVVDILKG VQDKMIRIEG HTDNVQIVGN LTKRFPTNWE LSAARAINVA 240
  241 RYLQGQGIDP TVLVAVANGE YRPVASNDTE EGRAKNRRIE IVLVPRDAPD RP

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	292	0.99