YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KDPC_GEOMG
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDIKPAIMM VLVFTIICGG IYPAVVTGIA QAVFPKEATG SFITDRSGRE IGSALIGQPF  60
   61 SDSKYFWPRP SATTDFGYNP AASGGSNSGP TNPDYLKTVA NRVKALKDTG VSTGIPTDLV 120
  121 QASASGLDPH ISPEAASVQI PRVAKARGMM EDKVRRLVSG HTEDRQFGII GSPRVNVLAL 180
  181 NLALDRLAP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.77
Transmembrane Helix	8	33	0.78
Non-Cytoplasmic	34	189	0.88