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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78223250, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKCAYYFLL IATLLCLSTI QTHAASGTLQ FKDTRLGNIT VSVFDWSPDN GLAVGVVPLP  60
   61 TSPASSDFNL LLHSFLTNFK GPNGIIAGSG LNADYEITVV MGATQTGFTD SSTIPVNTNF 120
  121 KLSSNKTINY FKVYYDTNLN SNSLTGQGYN DGILLMSGTI SNDNGNFSIT TNATVPLDNF 180
  181 LNNNYPTATT LQGGGGYAAS VAIDYYNPEF ITFTSPNARL SFATNTNEVT PFNQADPSAA 240
  241 FYNGTGFQTP IRGAGNVNGM PATQGKADFQ FQADANSSVQ YEACTGSIGD IVWHDLNRNG 300
  301 IQDPGEPGID GVPVSIYKAS DNSLITTTTT GVGPLNQHGY YQFTGLCAGN YKVVVDETKL 360
  361 PTGFTPTTSN VGSDPAIDSN GSPASVTLPT DSSSDQTIDF GYVSPCTGSI GDFVWLDMNR 420
  421 DGIQNDGPNA GINGATIRLY NDTLTTVLAT TTSGPNGYYQ FSGLCAGTYQ VVVDETTLPP 480
  481 GLLQTGSLQG TDRAIDSNGS PASVTLPTDS SSDQTIDFGY VARCTGTIGD YVWLDQNFNS 540
  541 LQDAGEPGID GVTINLRKAS DNSLITTTTT GSNGFYQFTG LCAGDYLVES TPPPGLSRVP 600
  601 LCSADQTIGN DSNCSPAQVT LPADNSSNQT IDFGFESACT GTIGDFVWED ANRNGIQDAG 660
  661 EQGINGVTLN LRRISDYSVI ATTTTNTVGY YQFNGLCAGS YKVEAITPTG YMPTPSCSSD 720
  721 QTIANDSNCN PAQVDLPSNF SPNQTIDFGF FTPCSGSLGD FVWNDLNHNG IQDANEPGIA 780
  781 GVPVTITGTN IYGTAVNTTV NTNASGMYTF TGLCQGTYTV TVPTPAGYTP TLTGKGTTAT 840
  841 DSNGSPASVT LPADNSSDQT IDFGFFTPCS GSIGDFVWND LNHNGVQDAN EPGIAGVPVT 900
  901 ITGTNIYGTA VSMTVNTNAS GMYQFTGLCQ GTYTVTVPTP AGYTPTLTGK GTTATDSNGS 960
  961 PATVVLAADN SSDQTIDFGF FTPCSGSIGD FVWNDLNHNG IQDANEPGIA GVPVTITGTN1020
 1021 IYGTAVSMTV NTNASGMYTF TGLCQGTYTV TVPTPAGFTP TLTGKGTTAT DSNGSPATVV1080
 1081 LAADNSSDQT IDFGFFTPCS GSIGDFVWND LNHNGIQDAN EPGIAGVPVT ITGTNIYGTT1140
 1141 VSMTVNTNAS GMYTFTGLCQ GTYTVTVPTP AGFTPTLTGK GTTATDSNGS PATVVLAADN1200
 1201 SSDQTIDFGF FTPTPSIKII KYTNGDDADL PTGPMIPVGG LVTWTYVVTN TGNVDLANVV1260
 1261 VTDDKLGAIC TIGPLATGAS QTCTKTGTAV MGQYANTGTV TGTFGTTTVT DQNPSHYFGV1320
 1321 KASIDIRKQA EGPDTRNFPA GSNVPFEIVV TNTGNVALNN VVVTDQMVPA CNATIGTLNP1380
 1381 GQIYTYTCTA PMVLNNFTNT ACTEGMAGTT TVTDCDDSTV VVTTPKISIK KYTNGDDADL1440
 1441 APGPYIPVGG EVKWEYVVTN TGNVDLTNVV VTDDKLGAIC TIGPLAAGAS QTCTKTGTAV1500
 1501 MGQYANMGTV TGQYNGTTVT DQNPSHYFGV KASIDIRKQA EGPDTRSFPA GSDVPFEIVV1560
 1561 TNTGNVALNN VKVTDQLVPA CNTTIGTLNP GQVYSYTCTA PMVLNGFTNT ACTEGMAGAV1620
 1621 VVTDCDDSTV TVTTAKIDIA KYVSIDGKTW FHTDSSDVLK VALCATCEEE YDKEHCDYNH1680
 1681 DNKCDERDVD YCKSNKYECD RHDSEHGSNK RKHRCDDSSN KSYCEDKAED AHERDHSDYN1740
 1741 NDGKCDERDI DYCRYNKSTC DRHDADHHST TRSYRCDDSY SKTTCESKKK DEEKSDKERS1800
 1801 DYNRDGKCDE RDVAYCQNNK SSCDSFDRDR GNLKRRFRCD DSTSGGKCED MARTEHDKDD1860
 1861 GDYNNDGKCD ERDIDYCKYN RSACDQHDKN HGSGKRTYRC DDSSNESSCE DRVRKEHDHD1920
 1921 RSDYDHDGKL DEDDIKYCQE NKDRCVKQDR DYSNCKRTYR CDDSEHREDC GYYAQREHDK1980
 1981 DDSDYNHDGK CDERDIDYCK NEQERCDEHD RDHKLTKRTY RCDDSSYKDS CGSYAQREHD2040
 2041 KDRSDYNRDG KRDERDIDYC KGNDEECIKH DKGHGNFTRS YRCDESSNKT LCESTRYSQN2100
 2101 KSEKDDSDYN RDGKCDERDI SYCKYNRDAC DKFDSDRGNR KRTYRCDDSS YKTSCQDKAE2160
 2161 YEHDRDHADY NRDGKCDERD IDNCKNSPYG CDDHDRDHGD SKRHYRCDDS YDKTRCEERS2220
 2221 REERDRESSC SGSGSYPSPA CGKVYFKYLV TNTGSTTLTN LTLTDDKNSV SSCTIPAGLN2280
 2281 PDGSFSCIIG PLPAKAGLQV NTATATGTYG GVTTTDTDKA YYYGCDGTAP KSPGYWKNHP2340
 2341 EAWPVESITI GGKTYTKAQA ISLMNTPVSG DKTYTLFKAL VAAKLDAMGC GDSSCVTDTI2400
 2401 AKSDAWMALH PVGSGVAGDS YAWKQAEPWY LILDDYINGK LVCGGSNTCT PPPPPAPTCG2460
 2461 QCSGGTTKLA LKYTGDCLAK VEVKDSNGRT LFSSTVAPDS SFNFTGMSTN GTMGQYVKVY2520
 2521 VNGSYKATIY TDCSKPIYPG MGIGSFNVVE GYSLNGGKFC RVSSSSCTSY DDDHYSSDYC2580
 2581 GSHDGESSCL NFFDHESSDS HHDD

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