YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78193778, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.48
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHDVFISGF GGQGVLLAGN LLGYAAMGEG KNVSFYPSYG VEKRGGAAMC TVVIADGEVG  60
   61 SPVVGNPSVS VILNQTSFDK YASRVKPGGV CIVNTSLVEI GDFSRSDIEL IPIPMNEIAM 120
  121 QLGDLRMVNM VAVGAYAAKT GAVSLQSLEG ALRKTLPERN HRFIPANVRA IEAGAQRSGS 180
  181 HFLK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.34
Transmembrane Helix	7	26	0.44
Non-Cytoplasmic	27	184	0.86