YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78193707, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTETGLKSG RRTMRFARLL LLPLIVIGTL SGCAVNMADI HGFNVISLEQ EKELGTKFAA  60
   61 EIEKQYPVYN DPEAQKYVDR LGRRLLTGAR EVSFDYVFKV VKDDSVNAFA IPGGRLYVHT 120
  121 GLLKAAQSET EVAAVMAHEI SHAVARHGTR QMTQQYGYSL VLSLVLGQNS NMLAQIAGEL 180
  181 FGKAGMMSYS RDYENQADFL GVETMSKAGY NPQGMVSFFQ KLDTMGQQNP SALTKFFSSH 240
  241 PLTSERIQRV QAEIAQLPPR TYPPVDNTDL QKIRARIK

Type	Start	End	Confidence
Signal Peptide	1	34	0.62
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	278	0.98