YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AROQ_GEOMG
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLVVHGPN LNLLGTREPG IYGVLTLDRI NEEISALAEE LGCSVSFFQS NSEGAIIDAI  60
   61 QQACGACDGI LINPAAYTHT SVAIRDALAA VALPVVEVHL SNIHRREEFR HHSFIAPVAV 120
  121 GQIAGFGADS YLLGLRALFT YIKKEIVTKA

Type	Start	End	Confidence
Cytoplasmic	1	112	0.48
Transmembrane Helix	113	132	0.58
Non-Cytoplasmic	133	150	0.80