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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56752324, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAMHGVPIA RRLMTEDGSL VYDPEAIARY YLNRPFAVWS RFLEILWPLF SFIFGLWFDA  60
   61 RTGASRRNQN QRAVQLRDLL TELGPAFIKV GQALSTRPDL VPPAYLEELT RLQDQLPAFP 120
  121 NAIAFEFIEA ELGVPPEAIF AELSDNPVSA ASLGQVYRGR LHTGEEVAVK VQRPGLAERI 180
  181 ALDLYILRGL AAWAMRNVRR VKSNLVAIAD EFGLRIFEEL DYRQEADNAE RFAELYGQLP 240
  241 DIYVPSIYRQ YTSRRVLTME WIQGTKLTEL QAIRNQGIDP AYLIERGVQC SLRQLLEYGF 300
  301 FHADPHPGNL LATPDGQLAY LDFGMMSQVE DYQRYGLIEA VVHLVNRDFQ GLARDYVKLE 360
  361 FLTPDTDLTP IIPALAGVFK DAMGASVADL NFKSITDQLS QVMYDYPFRV PAYYALIIRS 420
  421 LVTLEGIAIN VDPNFKVLSK AYPFIARQIL TDPSPDLRAS LRELLFNGGQ LRWNRLENLL 480
  481 RNASNSSDYD SEHLIQQTVD FLLSESGQDL RDRLVEELVN SLDRLGRGAL PLLRNQIRQR 540
  541 LGMDPEPDST LTDLQPLLRV LSLLQQGQRF EPQRFIPLIP VLGRPEVQQM GQQVVTGLAQ 600
  601 KALVRFIREV VVGDRRNNAI AA

YRC Informatics Platform - Version 3.0
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