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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56685435, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGAIVSASL TDVRQPIAHW HSLTVEECHQ QLDAHRNGLT AEVAADRLAL YGPNELVEQA  60
   61 GRSPLQILWD QFANIMLLML LAVAVVSGAL DLRDGQFPKD AIAILVIAVL NAVLGYLQES 120
  121 RAEKALAALK GMAAPLVRVR RDNRDQEIPV AGLVPGDLIL LEAGDQVPAD ARLVESANLQ 180
  181 VKESALPGEA EAVQKLADQQ LPTDVVIGDR TNCLFQGTEV LQGRGQALVY ATGMNTELGR 240
  241 IATLLQSVES EKTPLQQRLD KLGNVLVSGA LILVAIVVGL GVLNGQSWED LLSVGLSMAV 300
  301 AIVPEGLPAV ITVALAIGTQ RMVQRESLIR RLPAVETLGS VTTICSDKTG TLTQNKMVVQ 360
  361 QIHTLDHDFT VTGEGYVPAG HFLIGGEIIV PNDYRDLMLL LAAGAVCNDA ALVASGEHWS 420
  421 IVGDPTEGSL LTVAAKAGID PEGLQRVLPR QDEIPFTSER KRMSVVVADL GETTLTIREG 480
  481 QPYVLFVKGS AELILERCQH CFGNAQLESL TAATRQQILA AGEAMASAGM RVLGFAYRPS 540
  541 AIADVDEDAE TDLTWLGLMG QIDAPRPEVR EAVQRCRQAG IRTLMITGDH PLTAQAIARD 600
  601 LGITEVGHPV LTGQQLSAMN GAELDAAVRS VEVYARVAPE HKLRIVESLQ RQGEFVAMTG 660
  661 DGVNDAPALK QANIGVAMGI TGTDVSKEAS DMVLLDDNFA TIVAAVEEGR IVYGNIRKFI 720
  721 KYILGSNIGE LLTIASAPLL GLGAVPLTPL QILWMNLVTD GIPALALAVE PGDPTIMQRR 780
  781 PHNPQESIFA RGLGTYMLRV GVVFSAFTIV LMVIAYQYTQ VPLPGLDPKR WQTMVFTTLC 840
  841 LAQMGHAIPV RSDLLTIQTP MRTNPWLWLS VIVTALLQLA LVYVSPLQKF FGTHSLSQLD 900
  901 LAICLGFSLL LFVYLEAEKW VRQRRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle