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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYR_SYNP6
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPLAQLRD RFQAALAASF GPEWAATDPL LVPATNPKFG DYQSNVAMSL AKQLGQPPRA  60
   61 IAETLVQNLN LADLCEPPAI AGPGFINFTL QPSYLVAQLQ QLQTDERLGI QPVSPPQRVI 120
  121 VDFSSPNIAK EMHVGHLRST IIGDSIARVL EFQGHEVLRL NHVGDWGTQF GMLIAFLQEQ 180
  181 YPQALSQPDA LDISDLVAFY KQAKARFDED PSFQETARQR VVDLQSGEAT ARQAWQLLCD 240
  241 QSRREFQKIY DRLDIQLEER GESFYNPYLP AIVEDLRRLG LLVEDQGAQC VFLEGFQNKE 300
  301 GQPLPLIVQK SDGGYNYATT DLAALRYRLG QDQAQRIIYV TDSGQANHFA QVFQVAQRAG 360
  361 WLPAAAQIEH VPFGLVQGED GKKLKTRAGD TVRLRDLLDE AVDRARTDLT TRIAAEERSE 420
  421 TPEFIEAVAQ AVGLGAVKYA DLSQNRNSNY IFSFDKMLAL QGNTAPYLLY AYVRIQGIAR 480
  481 KGGIDFAQLD PVAAELTEPT ERSLAKQVLQ LGEVLDEVAR DLLPNRLCSY LFELSQTFNQ 540
  541 FYDRCPILNA EEPQRTSRLL LCDLTARTLK LGLSLLGISV LERM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle