YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COAE_RUEPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFRLGLTGS IGMGKSTTAQ MFVDEGCALW DADAAVHRLY SSGGAAVAPM RAAFPDAVVD  60
   61 DAVSRPVLKH IIAEDPQALK RIEAIVHPLV AEDRARFRDS ATADILVFDI PLLFETGGEA 120
  121 AMDAVACVSI PPEEQKARVM ARGTMTEAQF EQIRAKQMPN EEKCARSDFV IVTDTLDHAR 180
  181 AQVQDIVRQI RAGNIHA

Type	Start	End	Confidence
Signal Peptide	1	19	0.76
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	197	0.99