YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_RUEPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIAVLGSGA FGTALAISLA GKGPVTLWSR APEQARQMQE TRENHQRLPG LPLPAALNVT  60
   61 ADLDQATRCD TLLLAVPMQK LRGMLSEHAA ALHGRVLVAC CKGIELNSGL GPMAVMAETL 120
  121 PGTRTALLTG PSFAQDIARG LPTALTLACA DPDLGRDLQA QLTTTNLRLY RTTDTIGAEL 180
  181 GGALKNVIAI GCGACIGAGM GDSARAALLT RGFAEMQRLA ALKGARPETL MGLSGLGDLM 240
  241 LTCSSDLSRN YRFGLALGRQ EPFDRATTVE GVATAHAVAQ LARDLGIDMP ISTTVAQLSN 300
  301 GDYSVAEAMR SLLNRPLKEE

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	320	0.98