YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56698510, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAERILIAG GGIGGLAAAL GLARQGRRVL VLEKAAQLGE IGAGIQLGPN AFHAFDYLGV  60
   61 GDAARALAVY IDNLRLMDAI TGVEITRIPL DDPFRARMGN PYAVVHRGDL HGVFLRACQD 120
  121 SPLVELRTSS AVVGYEQDGT SATALLQDGT RETGAALIGA DGLWSKVRAQ MLDDGPPRVS 180
  181 GHTTYRSVIP VEDMPEELRW NAATLWAGPK CHIVHYPLQG WRSFNLVVTY HNDAPDPVAG 240
  241 MPVTADEVRK GFEHVSPVAR QVIDKGQDWK LWVLCDRDPV MTWTEGRVAL LGDAAHPMLQ 300
  301 YFAQGACMAM EDAVRLSALV GEGGEIETLL RRYQDSRRLR TARVQLQSRE IGEHIYHPDG 360
  361 AHAALRNAMM SAKTPEEWYD SIEWLYGGTG LTGAV

Type	Start	End	Confidence
Signal Peptide	1	23	0.81
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	395	0.98