YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680211, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSIAGKTA IVTGAANGIG LAIARQFASA GANVMFADMD EKGLEEQLGD LAEDGNIRYF  60
   61 AGDLRERLTV ANLLSATIDA FDQIDILVNG ARQVIPTDPL DTEDDSVRVA LNQNLFPAYR 120
  121 LSQAVAKRMI KQAGENGEGQ AGAIINLTSV AARRTHPDLL AYSVSTAALD QMTRAMAVAL 180
  181 APQRIRVNAI AIGSVMSASL QAALKDNREF RQDIERHTPL GRVAAANELV LTAQYLASDA 240
  241 SSFMTGQILT VDGGRTLLDP VAAPAH

Type	Start	End	Confidence
Signal Peptide	1	30	0.60
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	266	0.94