YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56698438, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINRRFFTLG LGALSLSACG GGAPLTASTP AAAPAQSWPT VPNAGWEAWV AGFRSRASAQ  60
   61 GINATTLDRA FRGAGFIPKV IERDRNQTEF KRSLEDYLAI AASDERIATG RQMLQQHGAL 120
  121 LTRIEAHYGV DKEIVTAIWG LESRYGARRG DVPIVSALST LAYDGRRGAF FEKQLIAALK 180
  181 ILQNGDTSPQ NMTGSWAGAM GHTQFIPTSY LAYAVDFTGD GRRDIWSEDP TDALASTAAY 240
  241 LANAGWVRGQ PWGGEVGSAA ANSGSPSAVL QPQEPGPKIA VFKNFSVIKR YNNSDSYAIG 300
  301 VGHLSDRLKG GGPFRASFGP DETGLTLEER KELQSRLTAA GYDTGGADGV IGSKSTAAIS 360
  361 DYQRARGLAV TGTPSVELLR QLRGG

Type	Start	End	Confidence
Signal Peptide	1	27	0.95
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	385	0.99