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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56680079, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAQLRPSPA ACPACVAVPA QPARPVPEDV QIALSLPGIH CSACISTVER ALQAHPGVED  60
   61 ARVNLTLKRA LIKAAPELRA ADLIPVLERA GYEAHELDPG TLNATRTDRA GRDLLMRLAV 120
  121 AGFASMNVML LSVSVWSGAS DATRDMFHWI SAAIAMPAIA FSGQPFFVRA WGALKARRLN 180
  181 MDVPIVLAIV LALVTSLWET SLSGEHAYFD AALTLTFFLL AGRYLDYRTR AVARSAAEEL 240
  241 AALEVPRAIR LQDGVETEVA VAQLAVGDLI LVRPGGRMPV DGEIVEGRSE LDRSLLTGET 300
  301 LPVFAEPGLV VSAGEVNLTG PLVIRANAVG QDTSLHRMAD LVAIAESGRS RYTSLADSAA 360
  361 KLYAPGVHIL SALSFVGWYL YSWDVRTALN IAAAVLIITC PCALGLAVPA VTTAASGRLF 420
  421 KRGMLIKHAT ALERLAEVDT VVFDKTGTLT AGTPELTNLG DHRRADMEIA LALAEASSHP 480
  481 LSVAITRAAR AAGLHPARID DVTEVPGFGT EGAWQGQRVR LGRAAWVGAE QAAQTSAWLA 540
  541 VGDRAPVAFL FSDALRPGAE ETVAGLKAAG KEVLLISGDT TGAVESLARR LGIESWMAEA 600
  601 LPQDKADRVQ ALADAGKRVL MVGDGLNDTA ALAAAHVSIS PASALDAARV ASDIVLLGND 660
  661 LSPIAGACDT AIRATKRIRE NFRIATVYNV IAVPLAVAGL CSPLIAALAM STSSITVSLN 720
  721 ALRLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle