YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56680033, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKTALLAT ALTSAAFAVS AQEVTVMSWG GAYTKSQVEA YHKPFTAETG IKVNSVDADN  60
   61 PATPIKAQVE AGNVSIDVAD VEFSDAVRLC DEGLLEEIDP AILSAAPDGT AATDDFIDGA 120
  121 LQDCAVANIV WSTSVAYNTA NVSMAPSSIA DFFDTGKIPG KRGLRKSAKA TLEMALMGDG 180
  181 VPANEVYDVL DTDEGVDRAF AVLDRIKSDI VWWEAGAQPP QLLADGEVVM STAYNGRIFN 240
  241 AAVAEGQPFE IMWDGQILDF DLFVVPKGAP NKDAAMQFIA FSTSTQALAD QAKWISYGPA 300
  301 RKSSGALVGL YQDGKTEMAP HMPTSEAALK NALVNNFEFW VDKDAELNER FNAWLAN

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	357	0.99