YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679914, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSTQRRCP MYVATLLTNP AIARLDPALV ESLRNAWGGG DAVWLSPDEA AEFSLATLPD  60
   61 NRWQVWDDLQ ALGVDLVVQP AEGRKKRMLL ADMDSTMIQQ ECIDELADEA GVGDRVKDIT 120
  121 ARAMNGELDF EGALLERVGL LRGLDEAVIG HVLDTRITLM PGGQALVATM RANGGYAALV 180
  181 SGGFTAFTAQ VAAQLGFDEN RANTLLAADG KLTGDVARPI LGRQAKVDAL EQITARLGLS 240
  241 EQDVIAVGDG ANDLGMLGRA GTGVALHAKP SVAAQCEVRI NHGDLTALLF VQGYARADFV 300
  301 TG

Type	Start	End	Confidence
Signal Peptide	1	23	0.75
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	302	0.97