YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679845, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNTAYHLTL PAARTSSVVF ASPHSGARYD PPFLAQTVLD DHAIRSSEDA FVDQLFDCAP  60
   61 EFGAPLLRAA APRAYLDLNR SCEELDPALI EGVRKGGHNP RVASGLGVIP RVVAGGRAIY 120
  121 RGKLSRAEAE QRLQAIWHPY HARLQHLLNE AHAAFGQAIL IDCHSMPREA LENSVGKAAG 180
  181 KPDVVLGDRF GASASPEIVD RVEAAFTAAG LHVVRNTPFA GAYVTQAYGR PSRRQHAIQI 240
  241 EIDRGLYMHE ATIRPNGNFS AMRELLRDVV AEICGFASLP LRLAAE

Type	Start	End	Confidence
Signal Peptide	1	21	0.54
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	286	0.99