YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56698090, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLILLFVL LSLMAACGRR APEPEPVPAP DPMRAELAQL VTYPKFGDAD PHPWDGRAPQ  60
   61 SYPIHGIDIS RWQGNIDWAT ARAAGVNFAF IKATEGGDVA DPKFAEHRRG AQAAGVPWGA 120
  121 YHYYYFCRPA EEQARWFIRH VPRGADLPHV LDMEWTHRSR TCPLRPEGAK VRAEARKFLD 180
  181 LLEAHYGRRP IIYTTVDFYR DTGIGQLRDT EFWLRSVAGH PRQVYPGAYW TFWQYTGTGL 240
  241 VPGIEGKVDI NVFRSAPDIW LRWKAGQIG

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	269	0.99