YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56698008, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVYDRVAL IGLGLIASSM FWAIKRAGLA GEVTGFARSE ATRDTARRIG LCDRVCESAA  60
   61 EAAEGADLVV LCVPVGAMGQ VAAEIGPVLK PGATVSDVGS VKRAVIDAVG PHIPEGVHFV 120
  121 PAHPLAGTEH SGPESGFAEL YDNRWCLLVP TEGSDPQAVA RLRALWEGMG ANVEEMEADH 180
  181 HDLVLAVTSH VPHAIAYTMV GVADHLRRVT ESEVIKYSAA GFRDFTRIAA SDPTMWRDVF 240
  241 LNNREATLDI LGRFTEELFM LQRAIRMGDE TYLFDYFTRT RAIRRGIIEA GQDTDAPDFG 300
  301 RVKGKPA

Type	Start	End	Confidence
Signal Peptide	1	23	0.70
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	307	0.91